MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus capitis
GW2.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 35
bases: 2,450,181 bps
CDS: 2,288
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,362
Total number of protein coding genes annotated/found:
2,288
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5007|JADGMA010000010.1
SEQF5007_00735
Genome Viewer
NA
AA
1851/617
441918-440068
Anaerobic ribonucleoside-triphosphate reductase
SEQF5007|JADGMA010000010.1
SEQF5007_00734
Genome Viewer
NA
AA
531/177
440071-439541
Anaerobic ribonucleoside-triphosphate reductase-activating protein
SEQF5007|JADGMA010000010.1
SEQF5007_00733
Genome Viewer
NA
AA
1299/433
439326-438028
Anaerobic C4-dicarboxylate transporter DcuA
SEQF5007|JADGMA010000010.1
SEQF5007_00732
Genome Viewer
NA
AA
1623/541
437643-436021
Glycine betaine transporter BetL
SEQF5007|JADGMA010000010.1
SEQF5007_00731
Genome Viewer
NA
AA
555/185
435378-435932
HTH-type transcriptional repressor OpcR
SEQF5007|JADGMA010000010.1
SEQF5007_00730
Genome Viewer
NA
AA
1491/497
435090-433600
Betaine aldehyde dehydrogenase
SEQF5007|JADGMA010000010.1
SEQF5007_00729
Genome Viewer
NA
AA
1719/573
433433-431715
Oxygen-dependent choline dehydrogenase
SEQF5007|JADGMA010000010.1
SEQF5007_00728
Genome Viewer
NA
AA
1176/392
431470-430295
N-acetylcysteine deacetylase
SEQF5007|JADGMA010000010.1
SEQF5007_00727
Genome Viewer
NA
AA
1383/461
430276-428894
Quinolone resistance protein NorB
SEQF5007|JADGMA010000010.1
SEQF5007_00726
Genome Viewer
NA
AA
213/71
428741-428529
hypothetical protein
SEQF5007|JADGMA010000010.1
SEQF5007_00725
Genome Viewer
NA
AA
471/157
428493-428023
Heme-degrading monooxygenase HmoB
SEQF5007|JADGMA010000010.1
SEQF5007_00724
Genome Viewer
NA
AA
366/122
427588-427223
hypothetical protein
SEQF5007|JADGMA010000010.1
SEQF5007_00723
Genome Viewer
NA
AA
1587/529
426951-425365
Acetyl-coenzyme A synthetase
SEQF5007|JADGMA010000010.1
SEQF5007_00722
Genome Viewer
NA
AA
2628/876
425126-422499
Pyruvate%2C phosphate dikinase
SEQF5007|JADGMA010000010.1
SEQF5007_00721
Genome Viewer
NA
AA
822/274
422497-421676
Putative pyruvate%2C phosphate dikinase regulatory protein
SEQF5007|JADGMA010000010.1
SEQF5007_00720
Genome Viewer
NA
AA
1506/502
421329-419824
putative malate:quinone oxidoreductase 2
SEQF5007|JADGMA010000012.1
SEQF5007_01106
Genome Viewer
NA
AA
765/255
421121-420357
HMP-PP phosphatase
SEQF5007|JADGMA010000010.1
SEQF5007_00719
Genome Viewer
NA
AA
861/287
419669-418809
hypothetical protein
SEQF5007|JADGMA010000012.1
SEQF5007_01105
Genome Viewer
NA
AA
696/232
419581-420276
Nickel import system ATP-binding protein NikE
SEQF5007|JADGMA010000012.1
SEQF5007_01104
Genome Viewer
NA
AA
780/260
418802-419581
Nickel import system ATP-binding protein NikD
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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